KEGG API© Karobben

KEGG API

KEGG API

list of all pathways:

curl https://rest.kegg.jp/list/pathway/dme
path:dme00010	Glycolysis / Gluconeogenesis - Drosophila melanogaster (fruit fly)
path:dme00020	Citrate cycle (TCA cycle) - Drosophila melanogaster (fruit fly)
path:dme00030	Pentose phosphate pathway - Drosophila melanogaster (fruit fly)

list of all organisms gene ID

curl https://rest.kegg.jp/list/dme
dme:Dmel_CG40494	CDS	X:127449..140340	RhoGAP1A; Rho GTPase activating protein at 1A, isoform A
dme:Dmel_CR43552	miRNA	X:133385..133502	mir-4915-RA
dme:Dmel_CG17131	CDS	X:140318..200663	tyn; trynity, isoform A
dme:Dmel_CG17707	CDS	X:complement(142731..148426)	CG17707; uncharacterized protein, isoform B
dme:Dmel_CG3038	CDS	X:complement(243954..245856)	CG3038; uncharacterized protein, isoform C
dme:Dmel_CG2995	CDS	X:245978..254650	G9a; G9a, isoform B
dme:Dmel_CG42376	CDS	X:254876..255524	CG42376; uncharacterized protein, isoform A

pathway information

curl https://rest.kegg.jp/get/dme00010
ENTRY       dme00010                    Pathway
NAME        Glycolysis / Gluconeogenesis - Drosophila melanogaster (fruit fly)
DESCRIPTION Glycolysis is the process of converting glucose into pyruvate and generating small amounts of ATP (energy) and NADH (reducing power). It is a central pathway that produces important precursor metabolites: six-carbon compounds of glucose-6P and fructose-6P and three-carbon compounds of glycerone-P, glyceraldehyde-3P, glycerate-3P, phosphoenolpyruvate, and pyruvate [MD:M00001]. Acetyl-CoA, another important precursor metabolite, is produced by oxidative decarboxylation of pyruvate [MD:M00307]. When the enzyme genes of this pathway are examined in completely sequenced genomes, the reaction steps of three-carbon compounds from glycerone-P to pyruvate form a conserved core module [MD:M00002], which is found in almost all organisms and which sometimes contains operon structures in bacterial genomes. Gluconeogenesis is a synthesis pathway of glucose from noncarbohydrate precursors. It is essentially a reversal of glycolysis with minor variations of alternative paths [MD:M00003].
CLASS       Metabolism; Carbohydrate metabolism
PATHWAY_MAP dme00010  Glycolysis / Gluconeogenesis
MODULE      dme_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:dme00010]
            dme_M00002  Glycolysis, core module involving three-carbon compounds [PATH:dme00010]
            dme_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:dme00010]
            dme_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:dme00010]
DBLINKS     GO: 0006096 0006094
ORGANISM    Drosophila melanogaster (fruit fly) [GN:dme]
GENE        Dmel_CG8094  Hex-C; hexokinase C [KO:K00844] [EC:2.7.1.1]
            Dmel_CG32849  Hex-t2; Hex-t2 [KO:K00844] [EC:2.7.1.1]
            Dmel_CG3001  Hex-A; hexokinase A, isoform C [KO:K00844] [EC:2.7.1.1]
            Dmel_CG33102  Hex-t1; Hex-t1 [KO:K00844] [EC:2.7.1.1]

KEGG modules

curl https://rest.kegg.jp/list/md
md:M00951	Cremeomycin biosynthesis, aspartate/3,4-AHBA => cremeomycin
md:M00952	Benzoxazinoid biosynthesis, indoleglycerol phosphate => DIMBOA-glucoside
md:M00953	Mugineic acid biosynthesis, methionine => 3-epihydroxymugineic acid
md:M00956	Lysine degradation, bacteria, L-lysine => succinate
md:M00957	Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
md:M00958	Adenine ribonucleotide degradation, AMP => Urate
md:M00959	Guanine ribonucleotide degradation, GMP => Urate
md:M00960	Lysine degradation, bacteria, L-lysine => D-lysine => succinate
md:M00961	Betacyanin biosynthesis, L-tyrosine => amaranthin
md:M00962	Psilocybin biosynthesis, tryptophan => psilocybin
md:M00963	Chanoclavine aldehyde biosynthesis, tryptophan => chanoclavine-I aldehyde
md:M00964	Fumigaclavine biosynthesis, chanoclavine-I aldehyde => fumigaclavine C
md:M00965	Vindoline biosynthesis, tabersonine => vindoline

Another Project

curl https://rest.kegg.jp/get/hsa05130/image --output test.png
curl https://rest.kegg.jp/get/hsa05130/conf --output test
<img src="test.png">
<button title ="123"; style="background-color: #0075eb; width: 50px;position: absolute; left: 485px; top: 959px;">ITGB1</button>
<div class="dropdown" style="background-color: #eb0027; width: 50px;position: absolute; left: 750px; top: 1788px;">

<button class="dropbtn" style="background-color: #eb0027">NAIP</button>
<div class="dropdown-content">
<a >Name</a>
<a >Name</a>
<a >Name</a>
</div>


<style>
.dropbtn {
background-color: black;
color: white;
padding: #px;
font-size: #px;
border: none;
}

.dropdown {
position: relative;
display: inline-block;
}

.dropdown-content {
display: none;
position: absolute;
background-color: lightgrey;
min-width: #px;
z-index: 1;
}

.dropdown-content a {
color: black;
padding: #px #px;
text-decoration: none;
display: block;
}
.dropdown-content a:hover {background-color: white;}
.dropdown:hover .dropdown-content {display: block;}
.dropdown:hover .dropbtn {background-color: grey;}
</style>
Author

Karobben

Posted on

2022-10-28

Updated on

2024-01-11

Licensed under

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