To create a fasta file from a VCF file, use a script or software that can extract the genomic sequence information from the VCF file and format it into the fasta format. This allows you to generate a sequence-based representation of the genetic variation data stored in the VCF file, making it easier to visualize, analyze, and compare the variants. The fasta file can then be used as input for various bioinformatics tools and pipelines. Who sad this?

Genome annotations help us understand the functions and roles of genes and genomic regions, leading to improved knowledge of biological processes and disease mechanisms. Who sad this?

How to copy files in linux faster than cp

Disk mount in Linux refers to the process of making a file system available for the operating system to access on a particular directory. This is done by mounting the file system on a directory, which makes it accessible to the system and its users. Who said this?

Chip-Seq, Know to Unknown = =

A very beautiful theme for personal blog powered by Hexo

Unmapped reads Annotations

DNA Seq Pipelines and tricks

This post would show you a pipeline to find the new or abnormal transcript isoforms after de-novo by Trinity

Tricks for dealing with VCF files

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ggbio, a powerful package to plot all kinds of sequence plot

Build BSgenome by youself in OS environment

python

For sharing some fancy tools for seeped up your work/or study