To create a fasta file from a VCF file, use a script or software that can extract the genomic sequence information from the VCF file and format it into the fasta format. This allows you to generate a sequence-based representation of the genetic variation data stored in the VCF file, making it easier to visualize, analyze, and compare the variants. The fasta file can then be used as input for various bioinformatics tools and pipelines. Who sad this?

Genome annotations help us understand the functions and roles of genes and genomic regions, leading to improved knowledge of biological processes and disease mechanisms. Who sad this?

Chip-Seq, Know to Unknown = =

Unmapped reads Annotations

DNA Seq Pipelines and tricks

This post would show you a pipeline to find the new or abnormal transcript isoforms after de-novo by Trinity

Tricks for dealing with VCF files

Single Cell RNA-Seq Notes from Seminal

Bioinformatics: scRNA-seq data processing practices, protocol from seurat

Quickest using python to build and visualize the tree from fasta file| Biopython; ggtree

Blast hundreds of sequence with Biopython scripts

Pymol: the best protein structure viewer

RNA-Seq annotation, GO, KEGG

Build A Personal BioDatabase with Mysql, an example of diets and gene interaction database

Install and maintain DGI-DB on your personal PC