0 Posted 2022-08-18Updated 2024-01-11Biology / Bioinformatics / Software / De nove14 minutes read (About 2079 words)

Find novo transcripts based on Trinity de-nove assembly

This post would show you a pipeline to find the new or abnormal transcript isoforms after de-novo by Trinity

0 Posted 2022-08-18Updated 2024-01-11Biology / Bioinformatics / Protocol / SNP4 minutes read (About 665 words)

SNP is fun: Tricks for dealing with VCF files

Tricks for dealing with VCF files

0 Posted 2021-10-31Updated 2024-01-11Biology / Bioinformatics / Single Cell5 minutes read (About 765 words)

Single Cell RNA-Seq Notes

Single Cell RNA-Seq Notes from Seminal

0 Posted 2021-10-30Updated 2024-01-11Biology / Bioinformatics / Single Cell12 minutes read (About 1821 words)

Single cell RNA-Seq Practice: Seurat

Bioinformatics: scRNA-seq data processing practices, protocol from seurat

0 Posted 2021-10-22Updated 2024-01-11Biology / Bioinformatics / Protocol4 minutes read (About 641 words)

Biopython: The quickest way to biuld and visualize tree with python

Quickest using python to build and visualize the tree from fasta file| Biopython; ggtree

0 Posted 2021-10-15Updated 2024-01-11Biology / Bioinformatics / Protocol4 minutes read (About 529 words)

Online Blast with Biopython

Blast hundreds of sequence with Biopython scripts

0 Posted 2021-09-17Updated 2024-09-30Biology / Bioinformatics / Protein Structure5 minutes read (About 791 words)

Pymol: the best protein structure viewer

0 Posted 2021-07-21Updated 2024-01-11Biology / Bioinformatics / Protocol / Annotation3 minutes read (About 504 words)

RNA-Seq, Annotation and Enrichment

RNA-Seq annotation, GO, KEGG

0 Posted 2021-01-31Updated 2024-01-11Biology / Database5 minutes read (About 764 words)

Build A Personal BioDatabase with Mysql

Build A Personal BioDatabase with Mysql, an example of diets and gene interaction database

0 Posted 2021-01-28Updated 2024-01-11Biology / Databasea minute read (About 122 words)

Install DGI-DB at local PC

Install and maintain DGI-DB on your personal PC

0 Posted 2020-09-05Updated 2024-01-11Biology / Bioinformatics / Protocol / SNPa few seconds read (About 19 words)

VCF processing

Processing Your SNP file with Python:

0 Posted 2020-09-05Updated 2024-01-11Biology / Bioinformatics / othersa few seconds read (About 96 words)

Skill NetWork

abi

0 Posted 2020-09-05Updated 2024-01-11Biology / Bioinformatics / others2 minutes read (About 279 words)

abi processing

abi

0 Posted 2020-07-28Updated 2024-01-11Biology / Bioinformatics / Software / Dna Methylation2 minutes read (About 346 words)

BatMeth2

An Integrated Package for Bisulfite DNA Methylation Data Analysis with Indel-sensitive Mapping.

0 Posted 2020-07-28Updated 2024-01-14Biology / Bioinformatics / Software / Bioconda3 minutes read (About 510 words)

Bioconda

An Integrated Package for Bisulfite DNA Methylation Data Analysis with Indel-sensitive Mapping.

Find novo transcripts based on Trinity de-nove assembly

SNP is fun: Tricks for dealing with VCF files

Single Cell RNA-Seq Notes

Single cell RNA-Seq Practice: Seurat

Biopython: The quickest way to biuld and visualize tree with python

Online Blast with Biopython

Pymol: the best protein structure viewer

RNA-Seq, Annotation and Enrichment

Build A Personal BioDatabase with Mysql

Install DGI-DB at local PC

VCF processing

Skill NetWork

abi processing

BatMeth2

Bioconda

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